bioservices
Unified Python interface to 40+ bioinformatics services. Use when querying multiple databases (UniProt, KEGG, ChEMBL, Reactome) in a single workflow with consistent API. Best for cross-database analysis, ID mapping across services. For quick single-database lookups use gget; for sequence/file manipulation use biopython.
Details
- Path
- skills/bioservices
- License
- GPLv3 license
- Allowed tools
- 1
- Bundled scripts
- 4
- Dependencies
- 4
Allowed tools
Read Write Edit Bash
Bundled scripts
- skills/bioservices/scripts/compound_cross_reference.py
- skills/bioservices/scripts/protein_analysis_workflow.py
- skills/bioservices/scripts/pathway_analysis.py
- skills/bioservices/scripts/batch_id_converter.py